Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.47□□□□□ -0.25
CX3CL1P78423 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.47□□□□□ -0.25
CX3CL1P78423 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.47□□□□□ -0.25
CX3CL1P78423 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 KRT8P49-201ENST00000604166 1432 ntBASIC13.47□□□□□ -0.25
CX3CL1P78423 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.47□□□□□ -0.25
CX3CL1P78423 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CX3CL1P78423 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.46□□□□□ -0.25
CX3CL1P78423 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.46□□□□□ -0.25
CX3CL1P78423 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CX3CL1P78423 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CX3CL1P78423 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.46□□□□□ -0.25
CX3CL1P78423 AP002490.2-201ENST00000524791 560 ntBASIC13.46□□□□□ -0.25
CX3CL1P78423 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.46□□□□□ -0.25
CX3CL1P78423 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CX3CL1P78423 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.46□□□□□ -0.25
CX3CL1P78423 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.46□□□□□ -0.25
CX3CL1P78423 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.46□□□□□ -0.25
CX3CL1P78423 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CX3CL1P78423 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CX3CL1P78423 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
CX3CL1P78423 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CX3CL1P78423 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CX3CL1P78423 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CX3CL1P78423 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.46□□□□□ -0.26
CX3CL1P78423 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CX3CL1P78423 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CX3CL1P78423 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CX3CL1P78423 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.46□□□□□ -0.26
CX3CL1P78423 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CX3CL1P78423 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CL1P78423 AC002310.6-201ENST00000624451 1377 ntBASIC13.45□□□□□ -0.26
CX3CL1P78423 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CL1P78423 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CL1P78423 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.45□□□□□ -0.26
CX3CL1P78423 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 AC022188.1-201ENST00000620960 1664 ntBASIC13.45□□□□□ -0.26
CX3CL1P78423 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 AC098831.1-202ENST00000438821 336 ntBASIC13.45□□□□□ -0.26
CX3CL1P78423 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.45□□□□□ -0.26
CX3CL1P78423 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
CX3CL1P78423 SLC25A6P2-201ENST00000497974 877 ntBASIC13.45□□□□□ -0.26
CX3CL1P78423 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CX3CL1P78423 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.45□□□□□ -0.26
CX3CL1P78423 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CX3CL1P78423 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CX3CL1P78423 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms