Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEP78395 AC092910.1-201ENST00000482027 1129 ntBASIC16.83■□□□□ 0.28
PRAMEP78395 AC093909.1-201ENST00000504731 1122 ntBASIC16.83■□□□□ 0.28
PRAMEP78395 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.83■□□□□ 0.28
PRAMEP78395 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.83■□□□□ 0.28
PRAMEP78395 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PRAMEP78395 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.83■□□□□ 0.28
PRAMEP78395 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 AL353732.1-201ENST00000569618 1459 ntBASIC16.83■□□□□ 0.28
PRAMEP78395 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.83■□□□□ 0.28
PRAMEP78395 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEP78395 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEP78395 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEP78395 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PRAMEP78395 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEP78395 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 TSPY26P-202ENST00000565928 3884 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEP78395 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
PRAMEP78395 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PRAMEP78395 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRAMEP78395 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEP78395 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEP78395 TPM4P1-201ENST00000436100 807 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 AC108073.2-201ENST00000464002 357 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEP78395 AC107918.2-201ENST00000530817 355 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEP78395 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 AC104692.2-201ENST00000603054 253 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEP78395 AC117500.6-201ENST00000624871 588 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEP78395 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 HYMAI-201ENST00000635591 3347 ntBASIC16.82■□□□□ 0.28
PRAMEP78395 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEP78395 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEP78395 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEP78395 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEP78395 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEP78395 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEP78395 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEP78395 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEP78395 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.81■□□□□ 0.28
PRAMEP78395 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEP78395 AC005412.3-201ENST00000580309 715 ntBASIC16.81■□□□□ 0.28
PRAMEP78395 MIR4492-201ENST00000581627 80 ntBASIC16.81■□□□□ 0.28
PRAMEP78395 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.81■□□□□ 0.28
PRAMEP78395 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PRAMEP78395 AP001350.2-201ENST00000625104 1094 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms