Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB38P57729 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.61■□□□□ 0.09
RAB38P57729 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB38P57729 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB38P57729 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.61■□□□□ 0.09
RAB38P57729 RN7SL589P-201ENST00000481268 310 ntBASIC15.61■□□□□ 0.09
RAB38P57729 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAB38P57729 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
RAB38P57729 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 MIR4469-201ENST00000583919 79 ntBASIC15.61■□□□□ 0.09
RAB38P57729 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 AC026120.1-201ENST00000611536 926 ntBASIC15.61■□□□□ 0.09
RAB38P57729 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
RAB38P57729 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAB38P57729 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB38P57729 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB38P57729 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAB38P57729 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.61■□□□□ 0.09
RAB38P57729 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 LINC01144-201ENST00000626198 1710 ntBASIC15.6■□□□□ 0.09
RAB38P57729 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RAB38P57729 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB38P57729 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB38P57729 SPDYE11-202ENST00000450699 704 ntBASIC15.6■□□□□ 0.09
RAB38P57729 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.6■□□□□ 0.09
RAB38P57729 SPDYE9P-201ENST00000570642 692 ntBASIC15.6■□□□□ 0.09
RAB38P57729 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.6■□□□□ 0.09
RAB38P57729 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 SPDYE10P-202ENST00000612005 668 ntBASIC15.6■□□□□ 0.09
RAB38P57729 SPDYE8P-202ENST00000612377 668 ntBASIC15.6■□□□□ 0.09
RAB38P57729 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.6■□□□□ 0.09
RAB38P57729 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB38P57729 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.6■□□□□ 0.09
RAB38P57729 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB38P57729 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB38P57729 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RAB38P57729 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB38P57729 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
RAB38P57729 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB38P57729 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms