Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.24■□□□□ 0.51
ATN1P54259 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATN1P54259 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ATN1P54259 FRMD8P1-201ENST00000440433 1524 ntBASIC18.24■□□□□ 0.51
ATN1P54259 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ATN1P54259 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.24■□□□□ 0.51
ATN1P54259 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.24■□□□□ 0.51
ATN1P54259 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC18.24■□□□□ 0.51
ATN1P54259 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.24■□□□□ 0.51
ATN1P54259 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.24■□□□□ 0.51
ATN1P54259 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.24■□□□□ 0.51
ATN1P54259 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC18.24■□□□□ 0.51
ATN1P54259 AL109936.8-201ENST00000641772 604 ntBASIC18.24■□□□□ 0.51
ATN1P54259 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATN1P54259 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.24■□□□□ 0.51
ATN1P54259 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.24■□□□□ 0.51
ATN1P54259 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
ATN1P54259 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.24■□□□□ 0.51
ATN1P54259 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATN1P54259 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.23■□□□□ 0.51
ATN1P54259 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.23■□□□□ 0.51
ATN1P54259 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.23■□□□□ 0.51
ATN1P54259 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.23■□□□□ 0.51
ATN1P54259 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
ATN1P54259 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATN1P54259 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC18.23■□□□□ 0.51
ATN1P54259 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ATN1P54259 SERBP1P3-201ENST00000459980 809 ntBASIC18.23■□□□□ 0.51
ATN1P54259 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.23■□□□□ 0.51
ATN1P54259 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.23■□□□□ 0.51
ATN1P54259 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATN1P54259 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.23■□□□□ 0.51
ATN1P54259 AL355816.2-201ENST00000610049 647 ntBASIC18.23■□□□□ 0.51
ATN1P54259 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.23■□□□□ 0.51
ATN1P54259 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.23■□□□□ 0.51
ATN1P54259 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.23■□□□□ 0.51
ATN1P54259 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ATN1P54259 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATN1P54259 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.22■□□□□ 0.51
ATN1P54259 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.22■□□□□ 0.51
ATN1P54259 AL671710.1-201ENST00000610245 2349 ntBASIC18.22■□□□□ 0.51
ATN1P54259 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 ABALON-201ENST00000629058 1903 ntBASIC18.22■□□□□ 0.51
ATN1P54259 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ATN1P54259 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.22■□□□□ 0.51
ATN1P54259 SLC25A1P3-201ENST00000395415 828 ntBASIC18.22■□□□□ 0.51
ATN1P54259 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.22■□□□□ 0.51
ATN1P54259 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.22■□□□□ 0.51
ATN1P54259 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 AC007389.4-201ENST00000454674 793 ntBASIC18.22■□□□□ 0.51
ATN1P54259 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATN1P54259 RN7SL219P-201ENST00000582872 296 ntBASIC18.22■□□□□ 0.51
ATN1P54259 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATN1P54259 AL353729.2-201ENST00000605859 1249 ntBASIC18.22■□□□□ 0.51
ATN1P54259 AL356094.1-201ENST00000624663 1212 ntBASIC18.22■□□□□ 0.51
ATN1P54259 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.22■□□□□ 0.51
ATN1P54259 AL033527.5-202ENST00000641632 1098 ntBASIC18.22■□□□□ 0.51
ATN1P54259 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms