Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NUP98P52948 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 AC105020.1-201ENST00000435356 2205 ntBASIC20.4■□□□□ 0.86
NUP98P52948 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
NUP98P52948 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
NUP98P52948 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.4■□□□□ 0.86
NUP98P52948 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.4■□□□□ 0.86
NUP98P52948 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.4■□□□□ 0.86
NUP98P52948 INE1-201ENST00000456273 945 ntBASIC20.4■□□□□ 0.86
NUP98P52948 AC119751.2-201ENST00000504529 210 ntBASIC20.4■□□□□ 0.86
NUP98P52948 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 SNX29P1-201ENST00000548357 1007 ntBASIC20.4■□□□□ 0.86
NUP98P52948 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
NUP98P52948 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.4■□□□□ 0.86
NUP98P52948 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP98P52948 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.4■□□□□ 0.86
NUP98P52948 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.4■□□□□ 0.86
NUP98P52948 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.39■□□□□ 0.86
NUP98P52948 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUP98P52948 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
NUP98P52948 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUP98P52948 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NUP98P52948 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.39■□□□□ 0.86
NUP98P52948 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
NUP98P52948 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
NUP98P52948 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.39■□□□□ 0.86
NUP98P52948 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.39■□□□□ 0.86
NUP98P52948 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.39■□□□□ 0.86
NUP98P52948 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.39■□□□□ 0.86
NUP98P52948 AC008735.3-201ENST00000596646 500 ntBASIC20.39■□□□□ 0.86
NUP98P52948 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.39■□□□□ 0.86
NUP98P52948 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NUP98P52948 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NUP98P52948 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP98P52948 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP98P52948 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP98P52948 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NUP98P52948 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
NUP98P52948 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
NUP98P52948 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
NUP98P52948 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NUP98P52948 AL512384.1-201ENST00000406683 331 ntBASIC20.39■□□□□ 0.85
NUP98P52948 HIST3H2BA-201ENST00000436555 524 ntBASIC20.39■□□□□ 0.85
NUP98P52948 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP98P52948 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
NUP98P52948 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.39■□□□□ 0.85
NUP98P52948 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
NUP98P52948 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NUP98P52948 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NUP98P52948 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NUP98P52948 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.38■□□□□ 0.85
NUP98P52948 U82695.1-201ENST00000635752 1889 ntBASIC20.38■□□□□ 0.85
NUP98P52948 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.38■□□□□ 0.85
NUP98P52948 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.38■□□□□ 0.85
NUP98P52948 GPR53P-205ENST00000457298 1084 ntBASIC20.38■□□□□ 0.85
NUP98P52948 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.38■□□□□ 0.85
NUP98P52948 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.38■□□□□ 0.85
NUP98P52948 AL008721.1-201ENST00000609964 604 ntBASIC20.38■□□□□ 0.85
NUP98P52948 MIR6752-201ENST00000618442 71 ntBASIC20.38■□□□□ 0.85
NUP98P52948 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.38■□□□□ 0.85
NUP98P52948 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP98P52948 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP98P52948 USP32P1-208ENST00000506594 1164 ntBASIC20.37■□□□□ 0.85
NUP98P52948 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.37■□□□□ 0.85
NUP98P52948 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.37■□□□□ 0.85
NUP98P52948 AC017083.2-201ENST00000608069 979 ntBASIC20.37■□□□□ 0.85
NUP98P52948 MIR6069-201ENST00000620069 79 ntBASIC20.37■□□□□ 0.85
NUP98P52948 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP98P52948 RNF216P1-203ENST00000404404 2427 ntBASIC20.37■□□□□ 0.85
NUP98P52948 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.37■□□□□ 0.85
NUP98P52948 AC005622.1-201ENST00000636801 1703 ntBASIC20.37■□□□□ 0.85
NUP98P52948 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NUP98P52948 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP98P52948 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms