Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPT1AP50416 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
CPT1AP50416 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.29■□□□□ 0.52
CPT1AP50416 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CPT1AP50416 AL512652.2-201ENST00000625156 1716 ntBASIC18.29■□□□□ 0.52
CPT1AP50416 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CPT1AP50416 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.29■□□□□ 0.52
CPT1AP50416 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 AC138969.3-201ENST00000546612 1459 ntBASIC18.29■□□□□ 0.52
CPT1AP50416 AC138932.2-201ENST00000548268 1459 ntBASIC18.29■□□□□ 0.52
CPT1AP50416 AC126755.4-201ENST00000549796 1459 ntBASIC18.29■□□□□ 0.52
CPT1AP50416 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CPT1AP50416 AC010336.2-201ENST00000564226 506 ntBASIC18.29■□□□□ 0.52
CPT1AP50416 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.29■□□□□ 0.52
CPT1AP50416 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.29■□□□□ 0.52
CPT1AP50416 AL359881.2-201ENST00000602973 570 ntBASIC18.29■□□□□ 0.52
CPT1AP50416 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 AL008721.1-201ENST00000609964 604 ntBASIC18.29■□□□□ 0.52
CPT1AP50416 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
CPT1AP50416 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.29■□□□□ 0.52
CPT1AP50416 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.29■□□□□ 0.52
CPT1AP50416 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPT1AP50416 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.28■□□□□ 0.52
CPT1AP50416 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPT1AP50416 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.28■□□□□ 0.52
CPT1AP50416 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CPT1AP50416 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
CPT1AP50416 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CPT1AP50416 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.28■□□□□ 0.52
CPT1AP50416 MEIS3P1-201ENST00000495167 958 ntBASIC18.28■□□□□ 0.52
CPT1AP50416 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.28■□□□□ 0.52
CPT1AP50416 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.28■□□□□ 0.52
CPT1AP50416 AC061975.2-201ENST00000581722 295 ntBASIC18.28■□□□□ 0.52
CPT1AP50416 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.28■□□□□ 0.52
CPT1AP50416 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPT1AP50416 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPT1AP50416 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPT1AP50416 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.28■□□□□ 0.52
CPT1AP50416 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.28■□□□□ 0.52
CPT1AP50416 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CPT1AP50416 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.28■□□□□ 0.52
CPT1AP50416 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.28■□□□□ 0.52
CPT1AP50416 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.27■□□□□ 0.52
CPT1AP50416 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.27■□□□□ 0.52
CPT1AP50416 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.27■□□□□ 0.52
CPT1AP50416 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 GNAQP1-201ENST00000444815 1067 ntBASIC18.27■□□□□ 0.52
CPT1AP50416 AC093004.1-201ENST00000508850 424 ntBASIC18.27■□□□□ 0.52
CPT1AP50416 DOC2GP-202ENST00000514950 1163 ntBASIC18.27■□□□□ 0.52
CPT1AP50416 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.27■□□□□ 0.52
CPT1AP50416 AL512361.1-201ENST00000554200 418 ntBASIC18.27■□□□□ 0.52
CPT1AP50416 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPT1AP50416 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.27■□□□□ 0.52
CPT1AP50416 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CPT1AP50416 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPT1AP50416 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CPT1AP50416 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CPT1AP50416 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.27■□□□□ 0.51
CPT1AP50416 GPAA1P2-202ENST00000606848 1787 ntBASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms