Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.46■□□□□ 0.71
MRE11P49959 AL645929.1-201ENST00000420084 975 ntBASIC19.46■□□□□ 0.71
MRE11P49959 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.46■□□□□ 0.71
MRE11P49959 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.46■□□□□ 0.71
MRE11P49959 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MRE11P49959 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.46■□□□□ 0.71
MRE11P49959 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 BX276092.5-203ENST00000456199 560 ntBASIC19.46■□□□□ 0.71
MRE11P49959 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.46■□□□□ 0.71
MRE11P49959 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 AL353719.1-201ENST00000566847 864 ntBASIC19.46■□□□□ 0.71
MRE11P49959 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MRE11P49959 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.46■□□□□ 0.71
MRE11P49959 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.46■□□□□ 0.71
MRE11P49959 AL121912.1-201ENST00000603683 238 ntBASIC19.46■□□□□ 0.71
MRE11P49959 AL390719.2-201ENST00000606993 987 ntBASIC19.46■□□□□ 0.71
MRE11P49959 AL121672.3-201ENST00000608644 468 ntBASIC19.46■□□□□ 0.71
MRE11P49959 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
MRE11P49959 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
MRE11P49959 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.46■□□□□ 0.71
MRE11P49959 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MRE11P49959 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRE11P49959 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.46■□□□□ 0.71
MRE11P49959 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.46■□□□□ 0.71
MRE11P49959 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MRE11P49959 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.45■□□□□ 0.7
MRE11P49959 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MRE11P49959 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 TSPY12P-201ENST00000421279 868 ntBASIC19.45■□□□□ 0.7
MRE11P49959 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 SPDYE13P-201ENST00000445314 798 ntBASIC19.45■□□□□ 0.7
MRE11P49959 POLD2P1-201ENST00000511220 997 ntBASIC19.45■□□□□ 0.7
MRE11P49959 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.45■□□□□ 0.7
MRE11P49959 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.45■□□□□ 0.7
MRE11P49959 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 AC138035.3-201ENST00000622706 2791 ntBASIC19.45■□□□□ 0.7
MRE11P49959 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MRE11P49959 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 PMS2P7-201ENST00000506558 1336 ntBASIC19.45■□□□□ 0.7
MRE11P49959 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.45■□□□□ 0.7
MRE11P49959 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRE11P49959 AC016734.2-201ENST00000624325 1377 ntBASIC19.44■□□□□ 0.7
MRE11P49959 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MRE11P49959 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MRE11P49959 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC19.44■□□□□ 0.7
MRE11P49959 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MRE11P49959 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MRE11P49959 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.44■□□□□ 0.7
MRE11P49959 HLA-J-203ENST00000494367 1087 ntBASIC19.44■□□□□ 0.7
MRE11P49959 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MRE11P49959 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
MRE11P49959 AC239800.4-201ENST00000603712 296 ntBASIC19.44■□□□□ 0.7
MRE11P49959 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.44■□□□□ 0.7
MRE11P49959 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.44■□□□□ 0.7
MRE11P49959 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.44■□□□□ 0.7
MRE11P49959 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MRE11P49959 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRE11P49959 CICP13-201ENST00000422015 2789 ntBASIC19.44■□□□□ 0.7
MRE11P49959 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MRE11P49959 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms