Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
COL15A1P39059 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.87■□□□□ 0.93
COL15A1P39059 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COL15A1P39059 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
COL15A1P39059 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL15A1P39059 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.86■□□□□ 0.93
COL15A1P39059 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 AL645728.1-201ENST00000366221 2101 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 AC079776.1-201ENST00000401540 1152 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.86■□□□□ 0.93
COL15A1P39059 DOC2GP-202ENST00000514950 1163 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
COL15A1P39059 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.86■□□□□ 0.93
COL15A1P39059 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.86■□□□□ 0.93
COL15A1P39059 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COL15A1P39059 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.86■□□□□ 0.93
COL15A1P39059 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL15A1P39059 CHCHD2P3-201ENST00000603038 451 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 AC008494.3-201ENST00000606615 944 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.86■□□□□ 0.93
COL15A1P39059 AC007431.3-201ENST00000623221 587 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.86■□□□□ 0.93
COL15A1P39059 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.86■□□□□ 0.93
COL15A1P39059 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COL15A1P39059 FZD10-202ENST00000539839 3282 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 AC080080.1-201ENST00000625121 2420 ntBASIC20.86■□□□□ 0.93
COL15A1P39059 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL15A1P39059 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.86■□□□□ 0.93
COL15A1P39059 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL15A1P39059 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.85■□□□□ 0.93
COL15A1P39059 AL512384.1-201ENST00000406683 331 ntBASIC20.85■□□□□ 0.93
COL15A1P39059 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.85■□□□□ 0.93
COL15A1P39059 AC093724.1-201ENST00000448659 1027 ntBASIC20.85■□□□□ 0.93
COL15A1P39059 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.85■□□□□ 0.93
COL15A1P39059 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
COL15A1P39059 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL15A1P39059 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL15A1P39059 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL15A1P39059 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.85■□□□□ 0.93
COL15A1P39059 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.85■□□□□ 0.93
COL15A1P39059 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
COL15A1P39059 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 AC114501.2-201ENST00000439631 535 ntBASIC20.85■□□□□ 0.93
COL15A1P39059 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL15A1P39059 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL15A1P39059 AC132938.2-201ENST00000579188 680 ntBASIC20.85■□□□□ 0.93
COL15A1P39059 AL591163.1-201ENST00000641757 987 ntBASIC20.85■□□□□ 0.93
COL15A1P39059 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.84■□□□□ 0.93
COL15A1P39059 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
COL15A1P39059 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.84■□□□□ 0.93
COL15A1P39059 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.84■□□□□ 0.93
COL15A1P39059 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.84■□□□□ 0.93
COL15A1P39059 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL15A1P39059 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms