Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC4P35249 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC4P35249 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC4P35249 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC4P35249 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.69■□□□□ 0.9
RFC4P35249 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.69■□□□□ 0.9
RFC4P35249 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.69■□□□□ 0.9
RFC4P35249 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.69■□□□□ 0.9
RFC4P35249 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC4P35249 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC4P35249 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC4P35249 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.69■□□□□ 0.9
RFC4P35249 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC4P35249 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.68■□□□□ 0.9
RFC4P35249 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFC4P35249 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RFC4P35249 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC4P35249 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 FAM86MP-201ENST00000340703 885 ntBASIC20.68■□□□□ 0.9
RFC4P35249 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC4P35249 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RFC4P35249 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.68■□□□□ 0.9
RFC4P35249 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFC4P35249 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.68■□□□□ 0.9
RFC4P35249 MIR4525-201ENST00000580000 75 ntBASIC20.68■□□□□ 0.9
RFC4P35249 AC008735.3-201ENST00000596646 500 ntBASIC20.68■□□□□ 0.9
RFC4P35249 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFC4P35249 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.68■□□□□ 0.9
RFC4P35249 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC4P35249 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.68■□□□□ 0.9
RFC4P35249 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFC4P35249 NOC2LP1-202ENST00000452600 2235 ntBASIC20.68■□□□□ 0.9
RFC4P35249 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC4P35249 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RFC4P35249 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.67■□□□□ 0.9
RFC4P35249 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC4P35249 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.67■□□□□ 0.9
RFC4P35249 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
RFC4P35249 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
RFC4P35249 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC4P35249 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.67■□□□□ 0.9
RFC4P35249 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
RFC4P35249 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.67■□□□□ 0.9
RFC4P35249 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
RFC4P35249 TMEM261P1-201ENST00000604899 340 ntBASIC20.67■□□□□ 0.9
RFC4P35249 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 AL033527.5-201ENST00000641382 801 ntBASIC20.67■□□□□ 0.9
RFC4P35249 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC4P35249 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.67■□□□□ 0.9
RFC4P35249 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC4P35249 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC4P35249 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.67■□□□□ 0.9
RFC4P35249 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RFC4P35249 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms