Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 AC022144.1-201ENST00000602255 1580 ntBASIC14.12□□□□□ -0.15
VAMP1P23763 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 AL603832.2-201ENST00000566195 2125 ntBASIC14.12□□□□□ -0.15
VAMP1P23763 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.12□□□□□ -0.15
VAMP1P23763 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.12□□□□□ -0.15
VAMP1P23763 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VAMP1P23763 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 AL353692.3-201ENST00000407031 1396 ntBASIC14.11□□□□□ -0.15
VAMP1P23763 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.11□□□□□ -0.15
VAMP1P23763 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
VAMP1P23763 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.11□□□□□ -0.15
VAMP1P23763 AC243964.3-201ENST00000623022 2028 ntBASIC14.11□□□□□ -0.15
VAMP1P23763 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VAMP1P23763 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.11□□□□□ -0.15
VAMP1P23763 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VAMP1P23763 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.11□□□□□ -0.15
VAMP1P23763 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
VAMP1P23763 ID1-201ENST00000376105 1233 ntBASIC14.1□□□□□ -0.15
VAMP1P23763 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.1□□□□□ -0.15
VAMP1P23763 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VAMP1P23763 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.1□□□□□ -0.15
VAMP1P23763 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms