Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TNFSF4P23510 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFSF4P23510 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 MCCD1P2-201ENST00000423228 335 ntBASIC14.26□□□□□ -0.13
TNFSF4P23510 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.26□□□□□ -0.13
TNFSF4P23510 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.26□□□□□ -0.13
TNFSF4P23510 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.26□□□□□ -0.13
TNFSF4P23510 AL513190.1-201ENST00000621254 727 ntBASIC14.26□□□□□ -0.13
TNFSF4P23510 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFSF4P23510 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFSF4P23510 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TNFSF4P23510 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TNFSF4P23510 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFSF4P23510 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 AL391256.1-201ENST00000443260 1855 ntBASIC14.25□□□□□ -0.13
TNFSF4P23510 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFSF4P23510 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 KRT18P13-201ENST00000400056 1290 ntBASIC14.25□□□□□ -0.13
TNFSF4P23510 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.25□□□□□ -0.13
TNFSF4P23510 PMS2P4-201ENST00000412466 1052 ntBASIC14.25□□□□□ -0.13
TNFSF4P23510 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFSF4P23510 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.25□□□□□ -0.13
TNFSF4P23510 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFSF4P23510 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
TNFSF4P23510 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 PCDHB17P-201ENST00000539533 2393 ntBASIC14.25□□□□□ -0.13
TNFSF4P23510 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFSF4P23510 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFSF4P23510 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFSF4P23510 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFSF4P23510 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFSF4P23510 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TNFSF4P23510 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFSF4P23510 SLC22A20-204ENST00000530038 1673 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
TNFSF4P23510 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TNFSF4P23510 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFSF4P23510 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 AC140658.5-201ENST00000438532 169 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TNFSF4P23510 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFSF4P23510 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFSF4P23510 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TNFSF4P23510 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFSF4P23510 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.24□□□□□ -0.13
TNFSF4P23510 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.24□□□□□ -0.13
TNFSF4P23510 MIR4492-201ENST00000581627 80 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFSF4P23510 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TNFSF4P23510 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.24□□□□□ -0.13
TNFSF4P23510 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms