Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KRT4P19013 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 AC233702.3-201ENST00000578656 1387 ntBASIC16.76■□□□□ 0.27
KRT4P19013 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
KRT4P19013 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KRT4P19013 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
KRT4P19013 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KRT4P19013 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KRT4P19013 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT4P19013 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT4P19013 AL031731.1-201ENST00000642131 2094 ntBASIC16.75■□□□□ 0.27
KRT4P19013 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT4P19013 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT4P19013 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.75■□□□□ 0.27
KRT4P19013 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT4P19013 BX276092.5-203ENST00000456199 560 ntBASIC16.75■□□□□ 0.27
KRT4P19013 AC096582.2-201ENST00000510860 516 ntBASIC16.75■□□□□ 0.27
KRT4P19013 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
KRT4P19013 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT4P19013 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.75■□□□□ 0.27
KRT4P19013 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
KRT4P19013 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.75■□□□□ 0.27
KRT4P19013 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 SIGLEC16-201ENST00000599858 1437 ntBASIC16.75■□□□□ 0.27
KRT4P19013 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
KRT4P19013 AC092850.2-201ENST00000623821 2697 ntBASIC16.75■□□□□ 0.27
KRT4P19013 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
KRT4P19013 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT4P19013 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KRT4P19013 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KRT4P19013 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
KRT4P19013 LINC01238-205ENST00000567549 1107 ntBASIC16.74■□□□□ 0.27
KRT4P19013 BNIP3P18-201ENST00000593976 575 ntBASIC16.74■□□□□ 0.27
KRT4P19013 AL121672.3-201ENST00000608644 468 ntBASIC16.74■□□□□ 0.27
KRT4P19013 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
KRT4P19013 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT4P19013 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.74■□□□□ 0.27
KRT4P19013 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.74■□□□□ 0.27
KRT4P19013 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.74■□□□□ 0.27
KRT4P19013 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
KRT4P19013 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 AL590787.1-201ENST00000568856 1315 ntBASIC16.73■□□□□ 0.27
KRT4P19013 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
KRT4P19013 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT4P19013 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT4P19013 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT4P19013 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
KRT4P19013 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms