Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ATF7P17544 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATF7P17544 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATF7P17544 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATF7P17544 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.24■□□□□ 0.51
ATF7P17544 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATF7P17544 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.24■□□□□ 0.51
ATF7P17544 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.24■□□□□ 0.51
ATF7P17544 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.24■□□□□ 0.51
ATF7P17544 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.24■□□□□ 0.51
ATF7P17544 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.24■□□□□ 0.51
ATF7P17544 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.24■□□□□ 0.51
ATF7P17544 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.24■□□□□ 0.51
ATF7P17544 DUX4L27-201ENST00000554796 1261 ntBASIC18.24■□□□□ 0.51
ATF7P17544 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
ATF7P17544 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 AP001059.3-201ENST00000619053 235 ntBASIC18.24■□□□□ 0.51
ATF7P17544 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.24■□□□□ 0.51
ATF7P17544 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATF7P17544 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.23■□□□□ 0.51
ATF7P17544 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATF7P17544 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.23■□□□□ 0.51
ATF7P17544 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATF7P17544 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ATF7P17544 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.23■□□□□ 0.51
ATF7P17544 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.23■□□□□ 0.51
ATF7P17544 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.23■□□□□ 0.51
ATF7P17544 AC067863.1-201ENST00000494933 530 ntBASIC18.23■□□□□ 0.51
ATF7P17544 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.23■□□□□ 0.51
ATF7P17544 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 AC087641.1-201ENST00000557561 1021 ntBASIC18.23■□□□□ 0.51
ATF7P17544 AC051619.7-201ENST00000568314 623 ntBASIC18.23■□□□□ 0.51
ATF7P17544 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.23■□□□□ 0.51
ATF7P17544 MIR3909-201ENST00000579518 119 ntBASIC18.23■□□□□ 0.51
ATF7P17544 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.23■□□□□ 0.51
ATF7P17544 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.23■□□□□ 0.51
ATF7P17544 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ATF7P17544 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
ATF7P17544 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
ATF7P17544 AC131009.4-201ENST00000624048 1740 ntBASIC18.23■□□□□ 0.51
ATF7P17544 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATF7P17544 WASH6P-202ENST00000359512 1437 ntBASIC18.23■□□□□ 0.51
ATF7P17544 TUBB8P12-201ENST00000308911 1335 ntBASIC18.23■□□□□ 0.51
ATF7P17544 TUBB7P-202ENST00000428444 1305 ntBASIC18.23■□□□□ 0.51
ATF7P17544 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.23■□□□□ 0.51
ATF7P17544 TUBB8P7-204ENST00000567960 1332 ntBASIC18.23■□□□□ 0.51
ATF7P17544 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.22■□□□□ 0.51
ATF7P17544 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.22■□□□□ 0.51
ATF7P17544 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.22■□□□□ 0.51
ATF7P17544 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATF7P17544 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.22■□□□□ 0.51
ATF7P17544 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
ATF7P17544 NKILA-202ENST00000614771 2598 ntBASIC18.22■□□□□ 0.51
ATF7P17544 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATF7P17544 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATF7P17544 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms