Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.45■□□□□ 0.38
RB1P06400 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 AC093724.1-201ENST00000448659 1027 ntBASIC17.45■□□□□ 0.38
RB1P06400 AC007389.4-201ENST00000454674 793 ntBASIC17.45■□□□□ 0.38
RB1P06400 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 ELK1P1-201ENST00000485699 580 ntBASIC17.45■□□□□ 0.38
RB1P06400 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 AC092658.1-201ENST00000505836 891 ntBASIC17.45■□□□□ 0.38
RB1P06400 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.45■□□□□ 0.38
RB1P06400 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.45■□□□□ 0.38
RB1P06400 AC023310.3-201ENST00000557027 670 ntBASIC17.45■□□□□ 0.38
RB1P06400 AC100756.1-201ENST00000562736 682 ntBASIC17.45■□□□□ 0.38
RB1P06400 RRP7BP-205ENST00000566851 833 ntBASIC17.45■□□□□ 0.38
RB1P06400 AC138749.3-201ENST00000567691 622 ntBASIC17.45■□□□□ 0.38
RB1P06400 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.45■□□□□ 0.38
RB1P06400 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 AC061975.2-201ENST00000581722 295 ntBASIC17.45■□□□□ 0.38
RB1P06400 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 AC116165.1-201ENST00000611806 668 ntBASIC17.45■□□□□ 0.38
RB1P06400 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.45■□□□□ 0.38
RB1P06400 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.45■□□□□ 0.38
RB1P06400 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.45■□□□□ 0.38
RB1P06400 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RB1P06400 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.44■□□□□ 0.38
RB1P06400 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.44■□□□□ 0.38
RB1P06400 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.44■□□□□ 0.38
RB1P06400 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 LINC02012-201ENST00000608206 1725 ntBASIC17.44■□□□□ 0.38
RB1P06400 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.44■□□□□ 0.38
RB1P06400 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RB1P06400 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.44■□□□□ 0.38
RB1P06400 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.44■□□□□ 0.38
RB1P06400 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.44■□□□□ 0.38
RB1P06400 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.44■□□□□ 0.38
RB1P06400 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RB1P06400 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.44■□□□□ 0.38
RB1P06400 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RB1P06400 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.44■□□□□ 0.38
RB1P06400 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RB1P06400 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.44■□□□□ 0.38
RB1P06400 CTBP2P3-201ENST00000585629 1255 ntBASIC17.44■□□□□ 0.38
RB1P06400 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RB1P06400 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RB1P06400 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.44■□□□□ 0.38
RB1P06400 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RB1P06400 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RB1P06400 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
RB1P06400 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.43■□□□□ 0.38
RB1P06400 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.43■□□□□ 0.38
RB1P06400 AL589702.1-201ENST00000641229 1509 ntBASIC17.43■□□□□ 0.38
RB1P06400 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RB1P06400 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.43■□□□□ 0.38
RB1P06400 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RB1P06400 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RB1P06400 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
RB1P06400 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms