Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.52■■□□□ 1.03
COL5A2P05997 EEF1DP4-201ENST00000446006 880 ntBASIC21.52■■□□□ 1.03
COL5A2P05997 KLF2P4-201ENST00000451959 1225 ntBASIC21.52■■□□□ 1.03
COL5A2P05997 RN7SL399P-201ENST00000471648 279 ntBASIC21.52■■□□□ 1.03
COL5A2P05997 TIMM17BP1-201ENST00000545713 516 ntBASIC21.52■■□□□ 1.03
COL5A2P05997 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.52■■□□□ 1.03
COL5A2P05997 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.51■■□□□ 1.03
COL5A2P05997 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.51■■□□□ 1.03
COL5A2P05997 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.51■■□□□ 1.03
COL5A2P05997 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
COL5A2P05997 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL5A2P05997 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.51■■□□□ 1.03
COL5A2P05997 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
COL5A2P05997 AL645728.1-201ENST00000366221 2101 ntBASIC21.51■■□□□ 1.03
COL5A2P05997 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COL5A2P05997 SLC25A47P1-201ENST00000531577 414 ntBASIC21.51■■□□□ 1.03
COL5A2P05997 RN7SL219P-201ENST00000582872 296 ntBASIC21.51■■□□□ 1.03
COL5A2P05997 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL5A2P05997 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL5A2P05997 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.5■■□□□ 1.03
COL5A2P05997 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL5A2P05997 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.5■■□□□ 1.03
COL5A2P05997 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.5■■□□□ 1.03
COL5A2P05997 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL5A2P05997 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL5A2P05997 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
COL5A2P05997 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.5■■□□□ 1.03
COL5A2P05997 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC21.5■■□□□ 1.03
COL5A2P05997 NME6-203ENST00000415644 849 ntTSL 2 BASIC21.5■■□□□ 1.03
COL5A2P05997 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 RNA5SP412-201ENST00000516234 123 ntBASIC21.5■■□□□ 1.03
COL5A2P05997 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.5■■□□□ 1.03
COL5A2P05997 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COL5A2P05997 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.5■■□□□ 1.03
COL5A2P05997 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC21.5■■□□□ 1.03
COL5A2P05997 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.5■■□□□ 1.03
COL5A2P05997 BRI3BPP1-201ENST00000594224 787 ntBASIC21.5■■□□□ 1.03
COL5A2P05997 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COL5A2P05997 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL5A2P05997 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.49■■□□□ 1.03
COL5A2P05997 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
COL5A2P05997 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL5A2P05997 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL5A2P05997 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL5A2P05997 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL5A2P05997 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL5A2P05997 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.49■■□□□ 1.03
COL5A2P05997 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
COL5A2P05997 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL5A2P05997 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL5A2P05997 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC21.49■■□□□ 1.03
COL5A2P05997 CSF2RBP1-201ENST00000447905 391 ntBASIC21.49■■□□□ 1.03
COL5A2P05997 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.49■■□□□ 1.03
COL5A2P05997 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
COL5A2P05997 AC108725.1-201ENST00000495472 409 ntBASIC21.49■■□□□ 1.03
COL5A2P05997 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.49■■□□□ 1.03
COL5A2P05997 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.49■■□□□ 1.03
COL5A2P05997 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.49■■□□□ 1.03
COL5A2P05997 MIR4321-201ENST00000592276 80 ntBASIC21.49■■□□□ 1.03
COL5A2P05997 CU634019.7-201ENST00000624153 1185 ntBASIC21.49■■□□□ 1.03
COL5A2P05997 FP236241.2-201ENST00000624906 1185 ntBASIC21.49■■□□□ 1.03
COL5A2P05997 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.49■■□□□ 1.03
COL5A2P05997 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms