Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 AC003669.1-201ENST00000334569 611 ntBASIC15.77■□□□□ 0.12
MT-ND1P03886 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND1P03886 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-ND1P03886 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND1P03886 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-ND1P03886 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.77■□□□□ 0.12
MT-ND1P03886 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND1P03886 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND1P03886 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.77■□□□□ 0.12
MT-ND1P03886 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MT-ND1P03886 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.77■□□□□ 0.12
MT-ND1P03886 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
MT-ND1P03886 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND1P03886 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND1P03886 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND1P03886 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.77■□□□□ 0.11
MT-ND1P03886 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.77■□□□□ 0.11
MT-ND1P03886 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
MT-ND1P03886 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND1P03886 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.77■□□□□ 0.11
MT-ND1P03886 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MT-ND1P03886 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.77■□□□□ 0.11
MT-ND1P03886 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.77■□□□□ 0.11
MT-ND1P03886 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.77■□□□□ 0.11
MT-ND1P03886 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
MT-ND1P03886 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND1P03886 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND1P03886 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
MT-ND1P03886 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND1P03886 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.76■□□□□ 0.11
MT-ND1P03886 HLA-J-202ENST00000469281 1241 ntBASIC15.76■□□□□ 0.11
MT-ND1P03886 AC091607.1-201ENST00000490318 1060 ntBASIC15.76■□□□□ 0.11
MT-ND1P03886 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND1P03886 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND1P03886 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.76■□□□□ 0.11
MT-ND1P03886 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
MT-ND1P03886 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MT-ND1P03886 AC011467.2-201ENST00000598425 242 ntBASIC15.76■□□□□ 0.11
MT-ND1P03886 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND1P03886 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MT-ND1P03886 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
MT-ND1P03886 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
MT-ND1P03886 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
MT-ND1P03886 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND1P03886 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.76■□□□□ 0.11
MT-ND1P03886 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MT-ND1P03886 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 MST1L-201ENST00000442552 2185 ntBASIC15.75■□□□□ 0.11
MT-ND1P03886 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.75■□□□□ 0.11
MT-ND1P03886 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.75■□□□□ 0.11
MT-ND1P03886 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MT-ND1P03886 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MT-ND1P03886 AP005901.3-202ENST00000581653 237 ntBASIC15.75■□□□□ 0.11
MT-ND1P03886 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.75■□□□□ 0.11
MT-ND1P03886 AC116407.4-201ENST00000623319 1061 ntBASIC15.75■□□□□ 0.11
MT-ND1P03886 AC073592.5-201ENST00000624854 528 ntBASIC15.75■□□□□ 0.11
MT-ND1P03886 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
MT-ND1P03886 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms