Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.81■□□□□ 0.76
COL1A1P02452 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.81■□□□□ 0.76
COL1A1P02452 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL1A1P02452 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 HLA-V-201ENST00000429037 534 ntBASIC19.8■□□□□ 0.76
COL1A1P02452 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.8■□□□□ 0.76
COL1A1P02452 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.8■□□□□ 0.76
COL1A1P02452 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 AC010336.2-201ENST00000564226 506 ntBASIC19.8■□□□□ 0.76
COL1A1P02452 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.8■□□□□ 0.76
COL1A1P02452 AL132655.2-201ENST00000596276 594 ntBASIC19.8■□□□□ 0.76
COL1A1P02452 AL008721.1-201ENST00000609964 604 ntBASIC19.8■□□□□ 0.76
COL1A1P02452 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.8■□□□□ 0.76
COL1A1P02452 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.8■□□□□ 0.76
COL1A1P02452 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
COL1A1P02452 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL1A1P02452 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL1A1P02452 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 SPDYE18-201ENST00000510091 1050 ntBASIC19.79■□□□□ 0.76
COL1A1P02452 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 AL589739.1-201ENST00000607720 493 ntBASIC19.79■□□□□ 0.76
COL1A1P02452 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COL1A1P02452 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.79■□□□□ 0.76
COL1A1P02452 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.79■□□□□ 0.76
COL1A1P02452 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL1A1P02452 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.79■□□□□ 0.76
COL1A1P02452 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.79■□□□□ 0.76
COL1A1P02452 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.79■□□□□ 0.76
COL1A1P02452 ZNF890P-202ENST00000530367 1156 ntBASIC19.79■□□□□ 0.76
COL1A1P02452 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.79■□□□□ 0.76
COL1A1P02452 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
COL1A1P02452 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.79■□□□□ 0.76
COL1A1P02452 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL1A1P02452 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
COL1A1P02452 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 AC087499.5-201ENST00000452760 1342 ntBASIC19.78■□□□□ 0.76
COL1A1P02452 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.78■□□□□ 0.76
COL1A1P02452 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.78■□□□□ 0.76
COL1A1P02452 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.78■□□□□ 0.76
COL1A1P02452 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms