Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.98□□□□□ -0.17
SIX6O95475 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 LINC02447-202ENST00000501888 2146 ntBASIC13.98□□□□□ -0.17
SIX6O95475 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.98□□□□□ -0.17
SIX6O95475 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.98□□□□□ -0.17
SIX6O95475 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.98□□□□□ -0.17
SIX6O95475 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 KRT89P-201ENST00000620027 1478 ntBASIC13.98□□□□□ -0.17
SIX6O95475 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.98□□□□□ -0.17
SIX6O95475 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SIX6O95475 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.98□□□□□ -0.17
SIX6O95475 AC006486.2-201ENST00000624246 2199 ntBASIC13.98□□□□□ -0.17
SIX6O95475 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 OR2I1P-210ENST00000642037 4691 ntBASIC13.97□□□□□ -0.17
SIX6O95475 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SIX6O95475 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.97□□□□□ -0.17
SIX6O95475 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.97□□□□□ -0.17
SIX6O95475 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.97□□□□□ -0.17
SIX6O95475 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 AC136621.1-201ENST00000624017 2304 ntBASIC13.97□□□□□ -0.17
SIX6O95475 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SIX6O95475 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SIX6O95475 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SIX6O95475 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 ESRRAP1-201ENST00000400596 1257 ntBASIC13.97□□□□□ -0.17
SIX6O95475 AC007663.1-201ENST00000438948 1240 ntBASIC13.97□□□□□ -0.17
SIX6O95475 MTCL1P1-201ENST00000446207 792 ntBASIC13.97□□□□□ -0.17
SIX6O95475 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.97□□□□□ -0.17
SIX6O95475 AP005242.2-201ENST00000580065 1175 ntBASIC13.97□□□□□ -0.17
SIX6O95475 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.97□□□□□ -0.17
SIX6O95475 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 REXO1L10P-201ENST00000615707 1290 ntBASIC13.97□□□□□ -0.17
SIX6O95475 REXO1L12P-201ENST00000622156 912 ntBASIC13.97□□□□□ -0.17
SIX6O95475 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.97□□□□□ -0.17
SIX6O95475 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 AC007686.3-201ENST00000619017 3487 ntBASIC13.97□□□□□ -0.17
SIX6O95475 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SIX6O95475 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 SBF1P1-201ENST00000444527 5631 ntBASIC13.97□□□□□ -0.17
SIX6O95475 SSR4P1-203ENST00000599569 2260 ntBASIC13.97□□□□□ -0.17
SIX6O95475 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.97□□□□□ -0.17
SIX6O95475 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SIX6O95475 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.96□□□□□ -0.17
SIX6O95475 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms