Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL5O76039 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CDKL5O76039 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDKL5O76039 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL5O76039 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
CDKL5O76039 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.34■□□□□ 0.69
CDKL5O76039 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.34■□□□□ 0.69
CDKL5O76039 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CDKL5O76039 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.34■□□□□ 0.69
CDKL5O76039 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.34■□□□□ 0.69
CDKL5O76039 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDKL5O76039 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.34■□□□□ 0.69
CDKL5O76039 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDKL5O76039 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL5O76039 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL5O76039 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL5O76039 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CDKL5O76039 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.33■□□□□ 0.69
CDKL5O76039 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL5O76039 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.33■□□□□ 0.69
CDKL5O76039 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CDKL5O76039 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL5O76039 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDKL5O76039 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CDKL5O76039 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL5O76039 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL5O76039 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL5O76039 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.33■□□□□ 0.68
CDKL5O76039 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.33■□□□□ 0.68
CDKL5O76039 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL5O76039 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.33■□□□□ 0.68
CDKL5O76039 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL5O76039 POU5F1P6-201ENST00000466990 990 ntBASIC19.33■□□□□ 0.68
CDKL5O76039 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.33■□□□□ 0.68
CDKL5O76039 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CDKL5O76039 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL5O76039 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL5O76039 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.33■□□□□ 0.68
CDKL5O76039 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.33■□□□□ 0.68
CDKL5O76039 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL5O76039 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.33■□□□□ 0.68
CDKL5O76039 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.33■□□□□ 0.68
CDKL5O76039 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDKL5O76039 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDKL5O76039 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDKL5O76039 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL5O76039 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDKL5O76039 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDKL5O76039 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 AC026396.1-201ENST00000419388 421 ntBASIC19.32■□□□□ 0.68
CDKL5O76039 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.32■□□□□ 0.68
CDKL5O76039 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKL5O76039 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL5O76039 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.32■□□□□ 0.68
CDKL5O76039 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.32■□□□□ 0.68
CDKL5O76039 AC005052.1-201ENST00000625181 2492 ntBASIC19.32■□□□□ 0.68
CDKL5O76039 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDKL5O76039 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.32■□□□□ 0.68
CDKL5O76039 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDKL5O76039 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDKL5O76039 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms