Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.75■□□□□ 0.27
GPC4O75487 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GPC4O75487 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 AC092171.3-201ENST00000610122 2651 ntBASIC16.74■□□□□ 0.27
GPC4O75487 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC4O75487 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC4O75487 AL391005.1-201ENST00000623953 2435 ntBASIC16.74■□□□□ 0.27
GPC4O75487 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC4O75487 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC4O75487 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.74■□□□□ 0.27
GPC4O75487 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC4O75487 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
GPC4O75487 AC008667.4-201ENST00000607370 168 ntBASIC16.74■□□□□ 0.27
GPC4O75487 MIR1199-201ENST00000621445 119 ntBASIC16.74■□□□□ 0.27
GPC4O75487 AC116407.3-201ENST00000623905 1129 ntBASIC16.74■□□□□ 0.27
GPC4O75487 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.74■□□□□ 0.27
GPC4O75487 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GPC4O75487 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 PI4KAP1-204ENST00000612579 1703 ntBASIC16.73■□□□□ 0.27
GPC4O75487 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC4O75487 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC4O75487 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.73■□□□□ 0.27
GPC4O75487 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 IGHV3-65-201ENST00000523210 341 ntBASIC16.73■□□□□ 0.27
GPC4O75487 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC4O75487 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC4O75487 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC4O75487 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.73■□□□□ 0.27
GPC4O75487 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GPC4O75487 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GPC4O75487 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.72■□□□□ 0.27
GPC4O75487 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.72■□□□□ 0.27
GPC4O75487 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GPC4O75487 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GPC4O75487 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.72■□□□□ 0.27
GPC4O75487 AC093909.1-201ENST00000504731 1122 ntBASIC16.72■□□□□ 0.27
GPC4O75487 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms