Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 AC040169.1-201ENST00000565382 521 ntBASIC15.58■□□□□ 0.08
TRIM3O75382 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.58■□□□□ 0.08
TRIM3O75382 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
TRIM3O75382 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.58■□□□□ 0.08
TRIM3O75382 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRIM3O75382 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.58■□□□□ 0.08
TRIM3O75382 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRIM3O75382 AL603756.1-201ENST00000606511 2163 ntBASIC15.58■□□□□ 0.08
TRIM3O75382 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRIM3O75382 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 PCDHB17P-201ENST00000539533 2393 ntBASIC15.57■□□□□ 0.08
TRIM3O75382 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.57■□□□□ 0.08
TRIM3O75382 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRIM3O75382 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 SLC25A6P2-201ENST00000497974 877 ntBASIC15.57■□□□□ 0.08
TRIM3O75382 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.57■□□□□ 0.08
TRIM3O75382 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM3O75382 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.57■□□□□ 0.08
TRIM3O75382 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM3O75382 LINC02012-201ENST00000608206 1725 ntBASIC15.57■□□□□ 0.08
TRIM3O75382 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM3O75382 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM3O75382 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TRIM3O75382 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM3O75382 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM3O75382 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM3O75382 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 AC096734.2-201ENST00000562054 433 ntBASIC15.56■□□□□ 0.08
TRIM3O75382 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM3O75382 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM3O75382 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM3O75382 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM3O75382 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM3O75382 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM3O75382 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM3O75382 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRIM3O75382 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM3O75382 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms