Protein–RNA interactions for Protein: O60477

BRINP1, BMP/retinoic acid-inducible neural-specific protein 1, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRINP1O60477 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRINP1O60477 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRINP1O60477 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRINP1O60477 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRINP1O60477 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRINP1O60477 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BRINP1O60477 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BRINP1O60477 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
BRINP1O60477 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.04■□□□□ 0.16
BRINP1O60477 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BRINP1O60477 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.04■□□□□ 0.16
BRINP1O60477 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BRINP1O60477 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BRINP1O60477 MRPS18AP1-201ENST00000414458 589 ntBASIC16.04■□□□□ 0.16
BRINP1O60477 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BRINP1O60477 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.04■□□□□ 0.16
BRINP1O60477 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BRINP1O60477 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.04■□□□□ 0.16
BRINP1O60477 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.04■□□□□ 0.16
BRINP1O60477 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.04■□□□□ 0.16
BRINP1O60477 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BRINP1O60477 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.04■□□□□ 0.16
BRINP1O60477 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.04■□□□□ 0.16
BRINP1O60477 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BRINP1O60477 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BRINP1O60477 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.03■□□□□ 0.16
BRINP1O60477 WASH6P-202ENST00000359512 1437 ntBASIC16.03■□□□□ 0.16
BRINP1O60477 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BRINP1O60477 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.03■□□□□ 0.16
BRINP1O60477 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 LINC02012-201ENST00000608206 1725 ntBASIC16.03■□□□□ 0.16
BRINP1O60477 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.03■□□□□ 0.16
BRINP1O60477 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.03■□□□□ 0.16
BRINP1O60477 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.03■□□□□ 0.16
BRINP1O60477 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.03■□□□□ 0.16
BRINP1O60477 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.03■□□□□ 0.16
BRINP1O60477 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.03■□□□□ 0.16
BRINP1O60477 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.03■□□□□ 0.16
BRINP1O60477 KRT17P7-201ENST00000451704 1104 ntBASIC16.03■□□□□ 0.16
BRINP1O60477 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 AC109635.5-201ENST00000533593 962 ntBASIC16.03■□□□□ 0.16
BRINP1O60477 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
BRINP1O60477 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
BRINP1O60477 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BRINP1O60477 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.03■□□□□ 0.16
BRINP1O60477 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
BRINP1O60477 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.03■□□□□ 0.16
BRINP1O60477 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BRINP1O60477 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.03■□□□□ 0.16
BRINP1O60477 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.02■□□□□ 0.16
BRINP1O60477 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.02■□□□□ 0.16
BRINP1O60477 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.02■□□□□ 0.16
BRINP1O60477 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
BRINP1O60477 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BRINP1O60477 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms