Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SYNGR3O43761 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.51□□□□□ -0.09
SYNGR3O43761 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.51□□□□□ -0.09
SYNGR3O43761 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.51□□□□□ -0.09
SYNGR3O43761 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 GPX1P2-201ENST00000429271 606 ntBASIC14.51□□□□□ -0.09
SYNGR3O43761 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.51□□□□□ -0.09
SYNGR3O43761 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.51□□□□□ -0.09
SYNGR3O43761 KRT19P2-202ENST00000557173 1012 ntBASIC14.51□□□□□ -0.09
SYNGR3O43761 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.51□□□□□ -0.09
SYNGR3O43761 PDPK2P-202ENST00000562415 1191 ntBASIC14.51□□□□□ -0.09
SYNGR3O43761 MIR3909-201ENST00000579518 119 ntBASIC14.51□□□□□ -0.09
SYNGR3O43761 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.51□□□□□ -0.09
SYNGR3O43761 AC010327.4-202ENST00000591484 748 ntBASIC14.51□□□□□ -0.09
SYNGR3O43761 AC139530.3-201ENST00000620344 690 ntBASIC14.51□□□□□ -0.09
SYNGR3O43761 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.51□□□□□ -0.09
SYNGR3O43761 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SYNGR3O43761 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SYNGR3O43761 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SYNGR3O43761 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SYNGR3O43761 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 AC025580.3-201ENST00000617932 1424 ntBASIC14.5□□□□□ -0.09
SYNGR3O43761 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SYNGR3O43761 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.5□□□□□ -0.09
SYNGR3O43761 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.5□□□□□ -0.09
SYNGR3O43761 RPSAP43-201ENST00000402237 625 ntBASIC14.5□□□□□ -0.09
SYNGR3O43761 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.5□□□□□ -0.09
SYNGR3O43761 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.5□□□□□ -0.09
SYNGR3O43761 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.5□□□□□ -0.09
SYNGR3O43761 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 AL031055.1-201ENST00000606362 631 ntBASIC14.5□□□□□ -0.09
SYNGR3O43761 AL513190.1-201ENST00000621254 727 ntBASIC14.5□□□□□ -0.09
SYNGR3O43761 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.5□□□□□ -0.09
SYNGR3O43761 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 PCGF3-213ENST00000620529 1899 ntBASIC14.5□□□□□ -0.09
SYNGR3O43761 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.5□□□□□ -0.09
SYNGR3O43761 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SYNGR3O43761 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.5□□□□□ -0.09
SYNGR3O43761 AC079328.2-201ENST00000561241 3354 ntBASIC14.5□□□□□ -0.09
SYNGR3O43761 AC092364.2-201ENST00000596710 2692 ntBASIC14.49□□□□□ -0.09
SYNGR3O43761 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
SYNGR3O43761 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.49□□□□□ -0.09
SYNGR3O43761 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SYNGR3O43761 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 CYP2T1P-202ENST00000641596 2535 ntBASIC14.49□□□□□ -0.09
SYNGR3O43761 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.49□□□□□ -0.09
SYNGR3O43761 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.49□□□□□ -0.09
SYNGR3O43761 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SYNGR3O43761 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms