Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MIR1908-201ENST00000410394 80 ntBASIC19.81■□□□□ 0.76
FOXN1O15353 TTTY23B-201ENST00000442790 549 ntBASIC19.81■□□□□ 0.76
FOXN1O15353 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXN1O15353 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 RHOQP1-201ENST00000555758 579 ntBASIC19.81■□□□□ 0.76
FOXN1O15353 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.81■□□□□ 0.76
FOXN1O15353 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.81■□□□□ 0.76
FOXN1O15353 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
FOXN1O15353 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXN1O15353 AC011676.5-201ENST00000624864 2660 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
FOXN1O15353 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXN1O15353 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 NKILA-202ENST00000614771 2598 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
FOXN1O15353 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
FOXN1O15353 RN7SL837P-201ENST00000463010 287 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 SLC25A6P2-201ENST00000497974 877 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
FOXN1O15353 STK25P1-201ENST00000585406 838 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXN1O15353 AC008494.3-201ENST00000606615 944 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXN1O15353 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXN1O15353 BX276092.7-203ENST00000637198 1536 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 AC084018.2-201ENST00000613093 2607 ntBASIC19.8■□□□□ 0.76
FOXN1O15353 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXN1O15353 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXN1O15353 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.79■□□□□ 0.76
FOXN1O15353 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 GOLGA2P4-201ENST00000441462 777 ntBASIC19.79■□□□□ 0.76
FOXN1O15353 GNAQP1-201ENST00000444815 1067 ntBASIC19.79■□□□□ 0.76
FOXN1O15353 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXN1O15353 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.79■□□□□ 0.76
FOXN1O15353 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 AC109462.3-201ENST00000573934 613 ntBASIC19.79■□□□□ 0.76
FOXN1O15353 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.79■□□□□ 0.76
FOXN1O15353 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.79■□□□□ 0.76
FOXN1O15353 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.79■□□□□ 0.76
FOXN1O15353 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.79■□□□□ 0.76
FOXN1O15353 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXN1O15353 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXN1O15353 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.79■□□□□ 0.76
FOXN1O15353 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
FOXN1O15353 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
FOXN1O15353 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 DFFBP1-201ENST00000433250 979 ntBASIC19.78■□□□□ 0.76
FOXN1O15353 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXN1O15353 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms