Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC022616.7-201ENST00000525383 220 ntBASIC11.45□□□□□ -0.58
NDUFA1O15239 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.45□□□□□ -0.58
NDUFA1O15239 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.45□□□□□ -0.58
NDUFA1O15239 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.45□□□□□ -0.58
NDUFA1O15239 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
NDUFA1O15239 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 AC006058.4-201ENST00000624016 1670 ntBASIC11.45□□□□□ -0.58
NDUFA1O15239 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NDUFA1O15239 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.45□□□□□ -0.58
NDUFA1O15239 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 AC125634.1-201ENST00000438758 1403 ntBASIC11.44□□□□□ -0.58
NDUFA1O15239 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 AL365209.1-201ENST00000624418 6473 ntBASIC11.44□□□□□ -0.58
NDUFA1O15239 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.44□□□□□ -0.58
NDUFA1O15239 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC11.44□□□□□ -0.58
NDUFA1O15239 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.44□□□□□ -0.58
NDUFA1O15239 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 AC083849.1-201ENST00000615227 514 ntBASIC11.44□□□□□ -0.58
NDUFA1O15239 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
NDUFA1O15239 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.44□□□□□ -0.58
NDUFA1O15239 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NDUFA1O15239 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
NDUFA1O15239 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.43□□□□□ -0.58
NDUFA1O15239 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NDUFA1O15239 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms