Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC025678.2-201ENST00000562061 970 ntBASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 AL161645.1-201ENST00000622716 1255 ntBASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 LINC00628-201ENST00000628516 1289 ntBASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPA3F8WFD2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AL627223.1-201ENST00000416693 442 ntBASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 HLA-J-203ENST00000494367 1087 ntBASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AC109322.1-201ENST00000524499 1264 ntBASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AP002490.2-201ENST00000524791 560 ntBASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 DUX4L17-201ENST00000557360 1267 ntBASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 RARRES2P8-201ENST00000566335 367 ntBASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA3F8WFD2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 MIR770-201ENST00000390219 98 ntBASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 RN7SL589P-201ENST00000481268 310 ntBASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AC079140.1-201ENST00000508039 487 ntBASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AL135744.1-201ENST00000565098 629 ntBASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AC093512.1-201ENST00000617969 520 ntBASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 AD000864.1-201ENST00000624076 2295 ntBASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA3F8WFD2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms