Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 FOXO1B-201ENST00000504678 1527 ntBASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 AL023806.1-201ENST00000603994 1649 ntBASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3BA6NDS4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TBC1D3BA6NDS4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
TBC1D3BA6NDS4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AC098859.1-201ENST00000502915 1238 ntBASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AC106820.2-201ENST00000563775 3264 ntBASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AF228730.6-201ENST00000641497 218 ntBASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AC084121.3-201ENST00000641716 218 ntBASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 AC105233.6-201ENST00000642093 218 ntBASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3BA6NDS4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 AL391256.1-201ENST00000443260 1855 ntBASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 AC004890.2-204ENST00000481968 304 ntBASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 AL138828.2-201ENST00000615812 383 ntBASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 SPDYE12P-201ENST00000618416 771 ntBASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
TBC1D3BA6NDS4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 AL035456.1-201ENST00000456064 1369 ntBASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TBC1D3BA6NDS4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms