Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 BICD1-207ENST00000551848 1962 ntBASIC15.82■□□□□ 0.12
LHX6Q9UPM6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 TTTY23B-201ENST00000442790 549 ntBASIC15.82■□□□□ 0.12
LHX6Q9UPM6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 SPDYE12P-201ENST00000618416 771 ntBASIC15.82■□□□□ 0.12
LHX6Q9UPM6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.82■□□□□ 0.12
LHX6Q9UPM6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
LHX6Q9UPM6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 AC087499.6-201ENST00000411576 835 ntBASIC15.81■□□□□ 0.12
LHX6Q9UPM6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 SEPT7P7-201ENST00000420492 1301 ntBASIC15.81■□□□□ 0.12
LHX6Q9UPM6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 MIR6869-201ENST00000619434 62 ntBASIC15.81■□□□□ 0.12
LHX6Q9UPM6 AL109936.8-201ENST00000641772 604 ntBASIC15.81■□□□□ 0.12
LHX6Q9UPM6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LHX6Q9UPM6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 AC020907.1-201ENST00000616460 1350 ntBASIC15.8■□□□□ 0.12
LHX6Q9UPM6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX6Q9UPM6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms