Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 KRT17P7-201ENST00000451704 1104 ntBASIC21.07■□□□□ 0.96
SCN11AQ9UI33 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.07■□□□□ 0.96
SCN11AQ9UI33 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.06■□□□□ 0.96
SCN11AQ9UI33 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 GK-202ENST00000378941 458 ntTSL 3 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 DOC2GP-202ENST00000514950 1163 ntBASIC21.06■□□□□ 0.96
SCN11AQ9UI33 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 LINC01115-203ENST00000606068 577 ntBASIC21.06■□□□□ 0.96
SCN11AQ9UI33 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCN11AQ9UI33 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 U82695.1-201ENST00000635752 1889 ntBASIC21.05■□□□□ 0.96
SCN11AQ9UI33 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SCN11AQ9UI33 AC074044.1-201ENST00000609673 707 ntBASIC21.05■□□□□ 0.96
SCN11AQ9UI33 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 AC007541.1-201ENST00000570282 1469 ntBASIC21.04■□□□□ 0.96
SCN11AQ9UI33 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
SCN11AQ9UI33 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 ATP5G2P4-201ENST00000442175 420 ntBASIC21.03■□□□□ 0.96
SCN11AQ9UI33 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 INE1-201ENST00000456273 945 ntBASIC21.03■□□□□ 0.96
SCN11AQ9UI33 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms