Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 TSPY16P-201ENST00000449843 468 ntBASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 AC003101.2-201ENST00000612557 442 ntBASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 PCDHB17P-201ENST00000539533 2393 ntBASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRIT1Q9P2V4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRIT1Q9P2V4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 KRT8P39-201ENST00000396270 1433 ntBASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRIT1Q9P2V4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRIT1Q9P2V4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms