Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 HTR5BP-201ENST00000430851 1154 ntBASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 ACTG1P14-201ENST00000446382 1122 ntBASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 MIR4469-201ENST00000583919 79 ntBASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 AL353135.1-201ENST00000606729 504 ntBASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NCKIPSDQ9NZQ3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NCKIPSDQ9NZQ3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 AC079328.2-201ENST00000561241 3354 ntBASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 AL355385.1-201ENST00000606123 409 ntBASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 AC007064.4-201ENST00000637740 555 ntBASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 FRMD8P1-201ENST00000440433 1524 ntBASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 KRT18P28-201ENST00000453838 1332 ntBASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCKIPSDQ9NZQ3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 PTCHD3P3-201ENST00000403073 906 ntBASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 LINC00982-205ENST00000420957 435 ntBASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 ACTG1P4-201ENST00000425123 1122 ntBASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 PDPK2P-202ENST00000562415 1191 ntBASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 AC027796.2-201ENST00000575326 344 ntBASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 AL513190.1-201ENST00000621254 727 ntBASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms