Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 FAM58CP-201ENST00000435741 640 ntBASIC17.73■□□□□ 0.43
CISHQ9NSE2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.73■□□□□ 0.43
CISHQ9NSE2 PCGF3-213ENST00000620529 1899 ntBASIC17.73■□□□□ 0.43
CISHQ9NSE2 ME2P1-201ENST00000426028 1970 ntBASIC17.73■□□□□ 0.43
CISHQ9NSE2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CISHQ9NSE2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 AC016027.1-202ENST00000607927 1699 ntBASIC17.72■□□□□ 0.43
CISHQ9NSE2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 AL078644.1-201ENST00000609881 752 ntBASIC17.72■□□□□ 0.43
CISHQ9NSE2 AC020765.3-201ENST00000613051 740 ntBASIC17.72■□□□□ 0.43
CISHQ9NSE2 C20orf181-201ENST00000623918 480 ntBASIC17.72■□□□□ 0.43
CISHQ9NSE2 AC092902.6-201ENST00000641783 218 ntBASIC17.72■□□□□ 0.43
CISHQ9NSE2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CISHQ9NSE2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.72■□□□□ 0.43
CISHQ9NSE2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 ALG1L5P-201ENST00000482043 771 ntBASIC17.71■□□□□ 0.43
CISHQ9NSE2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 AL161645.1-201ENST00000622716 1255 ntBASIC17.71■□□□□ 0.43
CISHQ9NSE2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
CISHQ9NSE2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CISHQ9NSE2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms