Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AL035633.1-201ENST00000406139 838 ntBASIC19.94■□□□□ 0.78
SALL1Q9NSC2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 AL390754.1-201ENST00000619088 582 ntBASIC19.94■□□□□ 0.78
SALL1Q9NSC2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SALL1Q9NSC2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.93■□□□□ 0.78
SALL1Q9NSC2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SALL1Q9NSC2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 AC124067.4-201ENST00000519691 2379 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 MIR661-201ENST00000384842 89 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 AC093724.1-201ENST00000448659 1027 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 UGT1A2P-201ENST00000454886 866 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 HLA-J-202ENST00000469281 1241 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 IGHV3-42-201ENST00000520410 361 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 AC020765.3-201ENST00000613051 740 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 AC073592.8-201ENST00000624126 511 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.92■□□□□ 0.78
SALL1Q9NSC2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SALL1Q9NSC2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SALL1Q9NSC2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms