Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 AP001005.1-201ENST00000571755 1248 ntBASIC15.93■□□□□ 0.14
BRF2Q9HAW0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 AC116407.3-201ENST00000623905 1129 ntBASIC15.93■□□□□ 0.14
BRF2Q9HAW0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
BRF2Q9HAW0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 VN2R19P-201ENST00000442399 1052 ntBASIC15.92■□□□□ 0.14
BRF2Q9HAW0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 UNC93B6-202ENST00000528242 690 ntBASIC15.92■□□□□ 0.14
BRF2Q9HAW0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 AL031432.2-201ENST00000566714 459 ntBASIC15.92■□□□□ 0.14
BRF2Q9HAW0 AL928711.1-201ENST00000570165 459 ntBASIC15.92■□□□□ 0.14
BRF2Q9HAW0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 AC021097.1-201ENST00000607902 574 ntBASIC15.92■□□□□ 0.14
BRF2Q9HAW0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
BRF2Q9HAW0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
BRF2Q9HAW0 MRPL3P1-201ENST00000400109 1033 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms