Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 AC139530.3-201ENST00000620344 690 ntBASIC19.61■□□□□ 0.73
RNF41Q9H4P4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 AC134684.3-201ENST00000641758 218 ntBASIC19.61■□□□□ 0.73
RNF41Q9H4P4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF41Q9H4P4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 AC011676.5-201ENST00000624864 2660 ntBASIC19.6■□□□□ 0.73
RNF41Q9H4P4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 TIMM8BP1-201ENST00000452384 211 ntBASIC19.6■□□□□ 0.73
RNF41Q9H4P4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 AC006538.3-201ENST00000612495 578 ntBASIC19.6■□□□□ 0.73
RNF41Q9H4P4 AL513210.1-201ENST00000629608 234 ntBASIC19.6■□□□□ 0.73
RNF41Q9H4P4 AC105339.1-204ENST00000636249 355 ntBASIC19.6■□□□□ 0.73
RNF41Q9H4P4 AC079781.4-201ENST00000641908 219 ntBASIC19.6■□□□□ 0.73
RNF41Q9H4P4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF41Q9H4P4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 UBALD1-205ENST00000590891 2641 ntBASIC19.59■□□□□ 0.73
RNF41Q9H4P4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 AC254562.1-201ENST00000417586 456 ntBASIC19.59■□□□□ 0.73
RNF41Q9H4P4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 AP000344.2-201ENST00000512987 629 ntBASIC19.59■□□□□ 0.73
RNF41Q9H4P4 KRT8P48-201ENST00000515599 1220 ntBASIC19.59■□□□□ 0.73
RNF41Q9H4P4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 AC243562.1-201ENST00000560672 389 ntBASIC19.59■□□□□ 0.73
RNF41Q9H4P4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF41Q9H4P4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF41Q9H4P4 PCGF3-213ENST00000620529 1899 ntBASIC19.58■□□□□ 0.73
RNF41Q9H4P4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.73
RNF41Q9H4P4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF41Q9H4P4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF41Q9H4P4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF41Q9H4P4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF41Q9H4P4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms