Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 LINC02560-201ENST00000596379 459 ntBASIC17.31■□□□□ 0.36
LRRC3Q9BY71 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 AC073592.8-201ENST00000624126 511 ntBASIC17.31■□□□□ 0.36
LRRC3Q9BY71 AC008761.3-201ENST00000624803 892 ntBASIC17.31■□□□□ 0.36
LRRC3Q9BY71 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
LRRC3Q9BY71 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 AC141586.5-201ENST00000624546 2050 ntBASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 FAM220BP-201ENST00000377689 816 ntBASIC17.3■□□□□ 0.36
LRRC3Q9BY71 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 AC015922.1-201ENST00000421102 1152 ntBASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 PCDHA12-202ENST00000613593 2588 ntBASIC17.3■□□□□ 0.36
LRRC3Q9BY71 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
LRRC3Q9BY71 AC100757.3-201ENST00000622361 1406 ntBASIC17.3■□□□□ 0.36
LRRC3Q9BY71 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 TERF1P3-201ENST00000505638 1227 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC027369.6-201ENST00000525520 931 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC190387.1-201ENST00000551683 408 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC003101.2-201ENST00000612557 442 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 SPTSSB-204ENST00000617024 1292 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 SPDYE12P-201ENST00000618416 771 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AF228730.6-201ENST00000641497 218 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC084121.3-201ENST00000641716 218 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 AC105233.6-201ENST00000642093 218 ntBASIC17.29■□□□□ 0.36
LRRC3Q9BY71 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRRC3Q9BY71 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms