Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC139887.3-201ENST00000568585 713 ntBASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL358472.4-201ENST00000633140 710 ntBASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC006449.6-201ENST00000612330 2296 ntBASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC105917.1-201ENST00000506637 2539 ntBASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.86□□□□□ -0.35
SHANK2-AS3Q9BTD1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 FAM210CP-201ENST00000445714 574 ntBASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC091076.1-201ENST00000610741 619 ntBASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 REXO1L3P-201ENST00000622202 1288 ntBASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 AC131009.4-201ENST00000624048 1740 ntBASIC12.85□□□□□ -0.35
SHANK2-AS3Q9BTD1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHANK2-AS3Q9BTD1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms