Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 TSPY26P-202ENST00000565928 3884 ntBASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PCGF1Q9BSM1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 YBX2P1-201ENST00000394192 760 ntBASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 DNAJB3-201ENST00000446806 729 ntBASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 AC139530.3-201ENST00000620344 690 ntBASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PCGF1Q9BSM1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 AC124947.2-201ENST00000547118 1133 ntBASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PCGF1Q9BSM1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms