Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 GPAA1P2-202ENST00000606848 1787 ntBASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AC080080.1-201ENST00000625121 2420 ntBASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 TSSK5P-201ENST00000423978 907 ntBASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AC098859.1-201ENST00000502915 1238 ntBASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AP002490.2-201ENST00000524791 560 ntBASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 AL590560.3-201ENST00000623350 461 ntBASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PAAF1Q9BRP4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AC241585.1-201ENST00000433527 519 ntBASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AC078925.2-201ENST00000624013 1973 ntBASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PAAF1Q9BRP4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 AC093724.1-201ENST00000448659 1027 ntBASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 AL512638.1-201ENST00000457493 794 ntBASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 RNA5SP410-201ENST00000516285 106 ntBASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PAAF1Q9BRP4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PAAF1Q9BRP4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms