Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
NPAS2Q99743 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 AL031284.1-201ENST00000419297 478 ntBASIC16.38■□□□□ 0.21
NPAS2Q99743 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 AP001005.1-201ENST00000571755 1248 ntBASIC16.38■□□□□ 0.21
NPAS2Q99743 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 AP000867.4-201ENST00000641616 219 ntBASIC16.38■□□□□ 0.21
NPAS2Q99743 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
NPAS2Q99743 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.38■□□□□ 0.21
NPAS2Q99743 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NPAS2Q99743 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS2Q99743 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS2Q99743 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.37■□□□□ 0.21
NPAS2Q99743 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.37■□□□□ 0.21
NPAS2Q99743 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 AL022342.1-201ENST00000400363 863 ntBASIC16.37■□□□□ 0.21
NPAS2Q99743 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.37■□□□□ 0.21
NPAS2Q99743 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
NPAS2Q99743 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.37■□□□□ 0.21
NPAS2Q99743 AF186996.4-201ENST00000467186 377 ntBASIC16.37■□□□□ 0.21
NPAS2Q99743 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.37■□□□□ 0.21
NPAS2Q99743 AC021087.4-201ENST00000563761 564 ntBASIC16.37■□□□□ 0.21
NPAS2Q99743 MIR7706-201ENST00000613747 67 ntBASIC16.37■□□□□ 0.21
NPAS2Q99743 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS2Q99743 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.37■□□□□ 0.21
NPAS2Q99743 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.37■□□□□ 0.21
NPAS2Q99743 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NPAS2Q99743 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS2Q99743 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
NPAS2Q99743 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NPAS2Q99743 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS2Q99743 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS2Q99743 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NPAS2Q99743 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS2Q99743 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NPAS2Q99743 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS2Q99743 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS2Q99743 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS2Q99743 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS2Q99743 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.36■□□□□ 0.21
NPAS2Q99743 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS2Q99743 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS2Q99743 AC122714.2-201ENST00000502787 707 ntBASIC16.36■□□□□ 0.21
NPAS2Q99743 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 AP002490.2-201ENST00000524791 560 ntBASIC16.36■□□□□ 0.21
NPAS2Q99743 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.36■□□□□ 0.21
NPAS2Q99743 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 AC064862.7-201ENST00000604520 867 ntBASIC16.36■□□□□ 0.21
NPAS2Q99743 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS2Q99743 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms