Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CCL13Q99616 KRT8P39-201ENST00000396270 1433 ntBASIC13.97□□□□□ -0.17
CCL13Q99616 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CCL13Q99616 AC092919.2-201ENST00000623631 1645 ntBASIC13.97□□□□□ -0.17
CCL13Q99616 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CCL13Q99616 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 SNX33P1-201ENST00000592116 1762 ntBASIC13.96□□□□□ -0.17
CCL13Q99616 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL13Q99616 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.96□□□□□ -0.17
CCL13Q99616 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CCL13Q99616 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCL13Q99616 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCL13Q99616 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL13Q99616 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CCL13Q99616 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL13Q99616 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
CCL13Q99616 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.96□□□□□ -0.17
CCL13Q99616 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL13Q99616 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL13Q99616 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.96□□□□□ -0.17
CCL13Q99616 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
CCL13Q99616 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 AC068137.2-201ENST00000605408 478 ntBASIC13.96□□□□□ -0.17
CCL13Q99616 AL031055.1-201ENST00000606362 631 ntBASIC13.96□□□□□ -0.17
CCL13Q99616 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCL13Q99616 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CCL13Q99616 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
CCL13Q99616 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CCL13Q99616 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CCL13Q99616 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.96□□□□□ -0.18
CCL13Q99616 AC006538.1-201ENST00000567905 1585 ntBASIC13.96□□□□□ -0.18
CCL13Q99616 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CCL13Q99616 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCL13Q99616 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.96□□□□□ -0.18
CCL13Q99616 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 HLA-A-202ENST00000376806 1854 ntBASIC13.95□□□□□ -0.18
CCL13Q99616 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CCL13Q99616 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL13Q99616 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCL13Q99616 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL13Q99616 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 RNU1-129P-201ENST00000384064 167 ntBASIC13.95□□□□□ -0.18
CCL13Q99616 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL13Q99616 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.95□□□□□ -0.18
CCL13Q99616 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCL13Q99616 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.95□□□□□ -0.18
CCL13Q99616 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.95□□□□□ -0.18
CCL13Q99616 U1.21-201ENST00000580816 167 ntBASIC13.95□□□□□ -0.18
CCL13Q99616 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms