Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRGV9Q99603 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRGV9Q99603 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TRGV9Q99603 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.02□□□□□ -0.32
TRGV9Q99603 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TRGV9Q99603 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.02□□□□□ -0.32
TRGV9Q99603 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.02□□□□□ -0.32
TRGV9Q99603 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
TRGV9Q99603 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRGV9Q99603 AC131009.4-201ENST00000624048 1740 ntBASIC13.02□□□□□ -0.32
TRGV9Q99603 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.02□□□□□ -0.32
TRGV9Q99603 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRGV9Q99603 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.02□□□□□ -0.32
TRGV9Q99603 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRGV9Q99603 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRGV9Q99603 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV9Q99603 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV9Q99603 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV9Q99603 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV9Q99603 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV9Q99603 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV9Q99603 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.02□□□□□ -0.33
TRGV9Q99603 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV9Q99603 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV9Q99603 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRGV9Q99603 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
TRGV9Q99603 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV9Q99603 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV9Q99603 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV9Q99603 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV9Q99603 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRGV9Q99603 PCGF3-213ENST00000620529 1899 ntBASIC13.02□□□□□ -0.33
TRGV9Q99603 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV9Q99603 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRGV9Q99603 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV9Q99603 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV9Q99603 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV9Q99603 AC091076.1-201ENST00000610741 619 ntBASIC13.01□□□□□ -0.33
TRGV9Q99603 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV9Q99603 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV9Q99603 AP001350.2-201ENST00000625104 1094 ntBASIC13.01□□□□□ -0.33
TRGV9Q99603 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV9Q99603 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.01□□□□□ -0.33
TRGV9Q99603 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 GPAA1P2-202ENST00000606848 1787 ntBASIC13.01□□□□□ -0.33
TRGV9Q99603 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms