Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC099548.2-209ENST00000480264 625 ntBASIC14.79□□□□□ -0.04
SPENQ96T58 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.79□□□□□ -0.04
SPENQ96T58 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SPENQ96T58 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.79□□□□□ -0.04
SPENQ96T58 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SPENQ96T58 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.79□□□□□ -0.04
SPENQ96T58 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SPENQ96T58 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SPENQ96T58 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.79□□□□□ -0.04
SPENQ96T58 KRT223P-202ENST00000449164 1292 ntBASIC14.79□□□□□ -0.04
SPENQ96T58 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.79□□□□□ -0.04
SPENQ96T58 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 AC020907.1-201ENST00000616460 1350 ntBASIC14.79□□□□□ -0.04
SPENQ96T58 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SPENQ96T58 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 AC141586.5-201ENST00000624546 2050 ntBASIC14.79□□□□□ -0.04
SPENQ96T58 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SPENQ96T58 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.79□□□□□ -0.04
SPENQ96T58 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.79□□□□□ -0.04
SPENQ96T58 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SPENQ96T58 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.79□□□□□ -0.04
SPENQ96T58 MIR6869-201ENST00000619434 62 ntBASIC14.79□□□□□ -0.04
SPENQ96T58 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPENQ96T58 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SPENQ96T58 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.78□□□□□ -0.04
SPENQ96T58 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.78□□□□□ -0.04
SPENQ96T58 AC093726.1-201ENST00000608064 963 ntBASIC14.78□□□□□ -0.04
SPENQ96T58 KRT8P49-201ENST00000604166 1432 ntBASIC14.78□□□□□ -0.04
SPENQ96T58 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.78□□□□□ -0.04
SPENQ96T58 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 MIR4492-201ENST00000581627 80 ntBASIC14.78□□□□□ -0.04
SPENQ96T58 AC015936.2-201ENST00000593177 259 ntBASIC14.78□□□□□ -0.04
SPENQ96T58 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 AC093525.8-201ENST00000624099 1342 ntBASIC14.78□□□□□ -0.04
SPENQ96T58 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SPENQ96T58 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.78□□□□□ -0.04
SPENQ96T58 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SPENQ96T58 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPENQ96T58 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPENQ96T58 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SPENQ96T58 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.77□□□□□ -0.04
SPENQ96T58 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.77□□□□□ -0.04
SPENQ96T58 FAM8A2P-201ENST00000528813 1142 ntBASIC14.77□□□□□ -0.04
SPENQ96T58 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.77□□□□□ -0.04
SPENQ96T58 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.77□□□□□ -0.04
SPENQ96T58 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPENQ96T58 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SPENQ96T58 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SPENQ96T58 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPENQ96T58 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPENQ96T58 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SPENQ96T58 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.77□□□□□ -0.05
SPENQ96T58 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.77□□□□□ -0.05
SPENQ96T58 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.77□□□□□ -0.05
SPENQ96T58 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
SPENQ96T58 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.77□□□□□ -0.05
SPENQ96T58 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SPENQ96T58 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SPENQ96T58 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms