Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 TMPOP1-202ENST00000424642 1267 ntBASIC13.57□□□□□ -0.24
RAB40CQ96S21 AC092647.4-201ENST00000457211 535 ntBASIC13.57□□□□□ -0.24
RAB40CQ96S21 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 RN7SL850P-201ENST00000579959 291 ntBASIC13.57□□□□□ -0.24
RAB40CQ96S21 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 AC023824.1-201ENST00000562945 2975 ntBASIC13.57□□□□□ -0.24
RAB40CQ96S21 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RAB40CQ96S21 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 AC099063.4-201ENST00000641099 1602 ntBASIC13.57□□□□□ -0.24
RAB40CQ96S21 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
RAB40CQ96S21 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AP002414.1-201ENST00000391405 1147 ntBASIC13.56□□□□□ -0.24
RAB40CQ96S21 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 KRT18P21-201ENST00000515767 1272 ntBASIC13.56□□□□□ -0.24
RAB40CQ96S21 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AC009533.2-201ENST00000543664 586 ntBASIC13.56□□□□□ -0.24
RAB40CQ96S21 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 RNF126P1-202ENST00000569893 925 ntBASIC13.56□□□□□ -0.24
RAB40CQ96S21 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAB40CQ96S21 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.56□□□□□ -0.24
RAB40CQ96S21 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms