Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 RNF216P1-203ENST00000404404 2427 ntBASIC17.91■□□□□ 0.46
SNX27Q96L92 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.91■□□□□ 0.46
SNX27Q96L92 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.91■□□□□ 0.46
SNX27Q96L92 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.91■□□□□ 0.46
SNX27Q96L92 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SNX27Q96L92 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SNX27Q96L92 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.91■□□□□ 0.46
SNX27Q96L92 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.91■□□□□ 0.46
SNX27Q96L92 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 AL512356.2-201ENST00000546955 174 ntBASIC17.91■□□□□ 0.46
SNX27Q96L92 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.91■□□□□ 0.46
SNX27Q96L92 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.91■□□□□ 0.46
SNX27Q96L92 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.91■□□□□ 0.46
SNX27Q96L92 GGT4P-201ENST00000623672 1708 ntBASIC17.91■□□□□ 0.46
SNX27Q96L92 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 AC073439.1-201ENST00000624121 1774 ntBASIC17.91■□□□□ 0.46
SNX27Q96L92 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.91■□□□□ 0.46
SNX27Q96L92 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.91■□□□□ 0.46
SNX27Q96L92 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SNX27Q96L92 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.9■□□□□ 0.46
SNX27Q96L92 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SNX27Q96L92 FOXO1B-201ENST00000504678 1527 ntBASIC17.9■□□□□ 0.46
SNX27Q96L92 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.9■□□□□ 0.46
SNX27Q96L92 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.9■□□□□ 0.46
SNX27Q96L92 AC026150.2-201ENST00000564693 1156 ntBASIC17.9■□□□□ 0.46
SNX27Q96L92 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.9■□□□□ 0.46
SNX27Q96L92 AC015911.4-201ENST00000588022 1070 ntBASIC17.9■□□□□ 0.46
SNX27Q96L92 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.9■□□□□ 0.46
SNX27Q96L92 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.9■□□□□ 0.46
SNX27Q96L92 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SNX27Q96L92 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.9■□□□□ 0.46
SNX27Q96L92 AC080080.1-201ENST00000625121 2420 ntBASIC17.9■□□□□ 0.46
SNX27Q96L92 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNX27Q96L92 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.9■□□□□ 0.46
SNX27Q96L92 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNX27Q96L92 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.46
SNX27Q96L92 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 GPAA1P2-202ENST00000606848 1787 ntBASIC17.89■□□□□ 0.45
SNX27Q96L92 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.89■□□□□ 0.45
SNX27Q96L92 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.89■□□□□ 0.45
SNX27Q96L92 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.89■□□□□ 0.45
SNX27Q96L92 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SNX27Q96L92 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 ALG1L8P-201ENST00000533887 760 ntBASIC17.89■□□□□ 0.45
SNX27Q96L92 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.89■□□□□ 0.45
SNX27Q96L92 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.89■□□□□ 0.45
SNX27Q96L92 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SNX27Q96L92 AC138932.1-201ENST00000534164 6830 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms