Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.03□□□□□ -0.32
RAX2Q96IS3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAX2Q96IS3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
RAX2Q96IS3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAX2Q96IS3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RAX2Q96IS3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
RAX2Q96IS3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 AC116353.5-201ENST00000638148 1699 ntBASIC13.02□□□□□ -0.32
RAX2Q96IS3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RAX2Q96IS3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.32
RAX2Q96IS3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RAX2Q96IS3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAX2Q96IS3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 AC140658.5-201ENST00000438532 169 ntBASIC13.02□□□□□ -0.33
RAX2Q96IS3 METTL21AP1-201ENST00000438852 635 ntBASIC13.02□□□□□ -0.33
RAX2Q96IS3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 LINC00896-202ENST00000609602 2128 ntBASIC13.02□□□□□ -0.33
RAX2Q96IS3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAX2Q96IS3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAX2Q96IS3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.01□□□□□ -0.33
RAX2Q96IS3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 AP000344.2-201ENST00000512987 629 ntBASIC13.01□□□□□ -0.33
RAX2Q96IS3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RAX2Q96IS3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
RAX2Q96IS3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms