Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.96■□□□□ 0.31
RTP4Q96DX8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.96■□□□□ 0.31
RTP4Q96DX8 AC024909.3-201ENST00000611513 2257 ntBASIC16.96■□□□□ 0.31
RTP4Q96DX8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTP4Q96DX8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTP4Q96DX8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTP4Q96DX8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.96■□□□□ 0.3
RTP4Q96DX8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.96■□□□□ 0.3
RTP4Q96DX8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTP4Q96DX8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTP4Q96DX8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 AC138932.1-201ENST00000534164 6830 ntBASIC16.95■□□□□ 0.3
RTP4Q96DX8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 RNU1-129P-201ENST00000384064 167 ntBASIC16.95■□□□□ 0.3
RTP4Q96DX8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 MIR940-201ENST00000401276 94 ntBASIC16.95■□□□□ 0.3
RTP4Q96DX8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 CXCL1P1-201ENST00000502804 216 ntBASIC16.95■□□□□ 0.3
RTP4Q96DX8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 IGHV3-22-201ENST00000520721 359 ntBASIC16.95■□□□□ 0.3
RTP4Q96DX8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 U1.21-201ENST00000580816 167 ntBASIC16.95■□□□□ 0.3
RTP4Q96DX8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTP4Q96DX8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTP4Q96DX8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.94■□□□□ 0.3
RTP4Q96DX8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTP4Q96DX8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms