Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNF216P1-203ENST00000404404 2427 ntBASIC15.36■□□□□ 0.05
HPS1Q92902 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HPS1Q92902 Z83836.1-201ENST00000624605 1642 ntBASIC15.35■□□□□ 0.05
HPS1Q92902 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 AL024508.2-201ENST00000607749 1894 ntBASIC15.35■□□□□ 0.05
HPS1Q92902 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.35■□□□□ 0.05
HPS1Q92902 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.35■□□□□ 0.05
HPS1Q92902 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.35■□□□□ 0.05
HPS1Q92902 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.35■□□□□ 0.05
HPS1Q92902 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.35■□□□□ 0.05
HPS1Q92902 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.35■□□□□ 0.05
HPS1Q92902 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.35■□□□□ 0.05
HPS1Q92902 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.35■□□□□ 0.05
HPS1Q92902 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.35■□□□□ 0.05
HPS1Q92902 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HPS1Q92902 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.35■□□□□ 0.05
HPS1Q92902 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.35■□□□□ 0.05
HPS1Q92902 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HPS1Q92902 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HPS1Q92902 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
HPS1Q92902 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.34■□□□□ 0.05
HPS1Q92902 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HPS1Q92902 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 AC092473.1-201ENST00000441098 221 ntBASIC15.34■□□□□ 0.05
HPS1Q92902 LINC00265-3P-201ENST00000447588 903 ntBASIC15.34■□□□□ 0.05
HPS1Q92902 KRT17P6-201ENST00000453795 1220 ntBASIC15.34■□□□□ 0.05
HPS1Q92902 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.34■□□□□ 0.05
HPS1Q92902 AP000867.3-201ENST00000524675 377 ntBASIC15.34■□□□□ 0.05
HPS1Q92902 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.34■□□□□ 0.05
HPS1Q92902 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.34■□□□□ 0.05
HPS1Q92902 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.34■□□□□ 0.05
HPS1Q92902 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 GPR32P1-201ENST00000601788 811 ntBASIC15.34■□□□□ 0.05
HPS1Q92902 AL390719.2-201ENST00000606993 987 ntBASIC15.34■□□□□ 0.05
HPS1Q92902 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 IGHV3-41-201ENST00000613121 348 ntBASIC15.34■□□□□ 0.05
HPS1Q92902 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.34■□□□□ 0.05
HPS1Q92902 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HPS1Q92902 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms