Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 INTS4P1-201ENST00000438455 1935 ntBASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 AC068587.6-202ENST00000641839 5619 ntBASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 AC079781.3-201ENST00000449110 356 ntBASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 AC104692.2-201ENST00000603054 253 ntBASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RAB40AQ8WXH6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RAB40AQ8WXH6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 AC005052.1-201ENST00000625181 2492 ntBASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 FDX1P1-201ENST00000449115 551 ntBASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 AF238378.1-201ENST00000526806 358 ntBASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RAB40AQ8WXH6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RAB40AQ8WXH6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms