Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 AL603756.1-201ENST00000606511 2163 ntBASIC14.21□□□□□ -0.13
CLDND2Q8NHS1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDND2Q8NHS1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 AL355385.1-201ENST00000606123 409 ntBASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 AC092902.6-201ENST00000641783 218 ntBASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDND2Q8NHS1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 AC092919.2-201ENST00000623631 1645 ntBASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 AP002472.1-201ENST00000577490 586 ntBASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDND2Q8NHS1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms